Parallel subgenome common carp

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August undefined, 2024

WebAsymmetric subgenome evolution has been observed in domesticated plants 15,16,19,20 , African clawed frog (Xenopus laevis) 18 , and common carp (Cyprinus carpio) 21, 22 . ... Single-cell... WebAquaculture production of common carp increases parallel to the increase of global aquaculture production of freshwater fishes. According to FAO (FIGIS, 2013), production of freshwater fishes was 31 839 573 tonnes in 2005, and increased to 45 335 385 tonnes by 2011 (an increase of more than 42 percent). During these years, the contribution of ...

Parallel subgenome structure and divergent expression …

WebSix pSNPs associated with the contents of PUFAs in common carp were identified, including one elovl5a pSNP, one elvl5b p SNP, and four fads2b pSNPS, which were predicted in the locations of transcriptional factor binding sites. The allo-tetraploid common carp encodes two duplicated fads2 genes (fads2a and fads2b) and two duplicated elovl5 … WebOct 11, 2024 · Common carp (Cyprinus carpio) is an allotetraploid species derived from recent whole genome duplication and provides a model to study polyploid genome … milonic webmail

The allotetraploid origin and asymmetrical genome evolution of …

WebThe common carp, P. guichenoti and P. tetrazona genomes con - tained 47,924, 24,284 and 21,943 protein-coding genes, respectively. Among them, at least 90.1% and 99.3% … WebSep 30, 2024 · We found evidence for parallel subgenome structure evolution and versatile expression divergence processes in these tetraploids. Resequencing 93 individuals uncovered the geographical genome... WebParallel subgenome structure and divergent expression evolution of allo-tetraploid common carp and goldfish. Nature Genetics 2024-10-30 ... (BMP4) expressions in muscles of tilapia and common carp indicate that BMP4 plays a role in the intermuscular bone distribution in a dose-dependent manner. Gene Expression Patterns 2024 Journal article milon hebrew dictionary

The evolutionary origin and domestication history of goldfish ... - PNAS

Cyprinus carpio (common carp) - Trends in Genetics

WebSep 22, 2024 · To determine the genetic background of the allotetraploid lineage of goldfish (♀) and common carp (♂), we identified 100 chromosomes in the intergeneric F 1 and 200 chromosomes in the allotetraploid F 22 and F 24 based on metaphase chromosome assays of cultured kidney cells. WebOct 1, 2024 · Parallel subgenome structure evolution in the allo-tetraploids was featured with equivalent chromosome components, higher protein identities, similar transposon … milon hobe koto dine mp3 free downloadWebSep 23, 2024 · Parallel subgenome structure and divergent expression evolution of allotetraploid common carp and goldfish. Nat Genet 53, 1493–1503. Article CAS PubMed PubMed Central Google Scholar miloni bullion merchants

"WebParallel subgenome structure evolution in the allo-tetraploids was featured with equivalent chromosome components, higher protein identities, similar transposon divergence and … " - Parallel subgenome common carp

Parallel subgenome common carp

Monsoon boosted radiation of the endemic East Asian carps

WebSep 1, 2024 · Parallel subgenome structure evolution in the allo-tetraploids was featured with equivalent chromosome components, higher protein identities, similar transposon divergence and contents, homoeologous exchanges, better synteny level, strong sequence compensation and symmetric purifying selection. WebParallel subgenome structure evolution in the allo-tetraploids was featured with equivalent chromosome components, higher protein identities, similar transposon divergence and contents, homoeologous exchanges, better synteny level, strong sequence compensation and symmetric purifying selection. ... Parallel subgenome structure and divergent ...

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WebDec 29, 2024 · Common carp ( Cyprinus carpio ) is an allotetraploid Cyprinid species derived from recent whole genome duplication and provides an excellent model system for studying polyploid genome evolution in vertebrates. To explore the origins and consequences of tetraploidy in C. carpio , we generated three chromosome-level new … WebNov 24, 2024 · Common carp, a world-wide cultured species, underwent a very recent allo-tetraploidization event and performed parallel subgenome evolution with divergent expression processes [ 12 ]. This allo-tetraploid genome has a slow gene loss rate and encodes almost twice gene numbers compared with the diploid fish.

WebMar 18, 2024 · The species-specific whole genome duplication and parallel subgenome evolution in common carp generated two homoeologues of fads2 (fads2a and fads2b) … WebOct 11, 2024 · Common carp (Cyprinus carpio) is an allotetraploid species derived from recent whole genome duplication and provides a model to study polyploid genome …

WebParallel subgenome structure and divergent expression evolution of allo-tetraploid common carp and goldfish Published in: Nature Genetics, September 2024 DOI: 10.1038/s41588-021-00933-9: Authors: WebOct 11, 2024 · Common carp (Cyprinus carpio) is an allotetraploid species derived from recent whole genome duplication and provides a model to study polyploid genome evolution in vertebrates.Here, we generate three chromosome-level reference genomes of C. carpio and compare to related diploid Cyprinid genomes. We identify a Barbinae lineage as …

WebSep 30, 2024 · In the present study, we report an improved genome assembly of allo-tetraploid common carp, an updated genome annotation of allo-tetraploid goldfish and …

WebJun 8, 2024 · Such questions can be tested by comparing molecular mechanisms of subgenome dominance in diverse lineages, including animals (Braasch & Postlethwait, 2012; Session et al., 2016; McElroy et al., 2024; Li et al., 2024). A fascinating question that remains to be answered is whether a parallel mechanism of subgenome dominance … milon holdingWebMar 18, 2024 · The allo-tetraploid common carp, one widely cultured food fish, is able to produce poly-unsaturated fatty acids (PUFAs). The genetic markers on the PUFA contents for breeding was limited. The polymorphisms in elovl5a and elovl5b, the rate-limiting enzymes in the PUFA biosynthesis, have not been investigated yet. milon indian spiceWebMay 27, 2024 · The ancient WGD within Cyprininae was identified via phylogenetic analyses of genome-wide markers, which integrated subgenomes M and P. Analyses compared both subgenomes of goldfish, common carp, and golden-line barbel ( Sinocyclocheilus grahami) to zebrafish and grass carp. miloni shroff mdWebSep 21, 2014 · This study on the C. carpio genome provides a valuable resource for the molecular-guided breeding and genetic improvement of the common carp. Results … milon homes nyWebDec 4, 2024 · The common carp is a representative polyploidy species of the Cyprininae, which includes diploids, tetraploids, and higher polyploids. The common carp is widely … milon lenwithWebSep 30, 2024 · In the present study, we report an improved genome assembly of allo-tetraploid common carp, an updated genome annotation of allo-tetraploid goldfish and the chromosome-scale assemblies of a progenitor-like diploid Puntius tetrazona and an outgroup diploid Paracanthobrama guichenoti. milon isokinetisches trainingWebGoldfish (Carassius auratus) were domesticated in ancient China from crucian carp (both are still considered the same species) (1–3), which is one of the most important farmed fish, with global aquaculture production of 3.096 million tons of crucian carp in 2024 ().The appearance of red scales on normally gray or silver crucian carp was first recorded … milon michael